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A

AbstractArray<T extends AbstractArray<T,U,D,E>,U extends AbstractArray<? extends U,?,?,?>,D extends AbstractArray<? extends D,?,?,?>,E> - Class in org.shared.array

An abstract base class for multidimensional arrays of real and complex values.

AbstractArray(double[], int, Array.IndexingOrder, int[], int[]) - Constructor for class org.shared.array.AbstractArray

Default constructor.

AbstractComplexArray<C extends AbstractComplexArray<C,R>,R extends AbstractRealArray<R,C>> - Class in org.shared.array

An abstract base class for arrays of complex values.

AbstractComplexArray(double[], int, int[], int[]) - Constructor for class org.shared.array.AbstractComplexArray

Default constructor.

AbstractComplexArray.Complex - Class in org.shared.array

A representation of complex numbers.

AbstractComplexArray.Complex(double, double) - Constructor for class org.shared.array.AbstractComplexArray.Complex

Default constructor.

AbstractFilteredHandler<H extends AbstractFilteredHandler<H,C,T>,C extends Connection,T> - Class in org.shared.net.handler

An abstract base class implementing much of FilteredHandler.

AbstractFilteredHandler(String) - Constructor for class org.shared.net.handler.AbstractFilteredHandler

Default constructor.

AbstractGmModel - Class in org.shared.stat.ml

An abstract base class for Gaussian mixture models characterized by their initialization and update rules.

AbstractGmModel() - Constructor for class org.shared.stat.ml.AbstractGmModel

Default constructor.

AbstractRealArray<R extends AbstractRealArray<R,C>,C extends AbstractComplexArray<C,R>> - Class in org.shared.array

An abstract base class for arrays of real values.

AbstractRealArray(double[], Array.IndexingOrder, int[], int[]) - Constructor for class org.shared.array.AbstractRealArray

Default constructor.

AbstractRealArray.RealMap - Interface in org.shared.array

Defines an elementwise "map" operation over real-valued multidimensional arrays.

AbstractRealArray.RealReduce - Interface in org.shared.array

Defines an elementwise "reduce" operation over real-valued multidimensional arrays.

AbstractTestVerifier<T extends Event<T,TestXmlEvent.TestXmlEventType,SourceType>> - Class in org.shared.test.net

An implementation of SourceLocal that serves as a base class for checking the contents of incoming events against their expected values.

AbstractTestVerifier(long, int) - Constructor for class org.shared.test.net.AbstractTestVerifier

Default constructor.

AbstractTestVerifier.AbstractReceiverVerifier<T extends Event<T,TestXmlEvent.TestXmlEventType,SourceType>> - Class in org.shared.test.net

A subclass of AbstractTestVerifier that maintains receiver state.

AbstractTestVerifier.AbstractReceiverVerifier() - Constructor for class org.shared.test.net.AbstractTestVerifier.AbstractReceiverVerifier

Default constructor.

AbstractTestVerifier.AbstractSenderVerifier<T extends Event<T,TestXmlEvent.TestXmlEventType,SourceType>> - Class in org.shared.test.net

A subclass of AbstractTestVerifier that maintains sender state.

AbstractTestVerifier.AbstractSenderVerifier(long, int, int) - Constructor for class org.shared.test.net.AbstractTestVerifier.AbstractSenderVerifier

Default constructor.

AbstractTestVerifier.DataEventDefinition - Interface in org.shared.test.net

Defines data events.

AbstractTestVerifier.ErrorEventDefinition - Interface in org.shared.test.net

Defines error events.

AbstractTestVerifier.SequenceEventDefinition - Interface in org.shared.test.net

Defines sequence events.

AbstractTestVerifier.VerifierStatus - Enum in org.shared.test.net

An enumeration of verifier states.

add(FilterFactory<? extends Filter<T, ? super I>, T, ? super I, ? super H>) - Method in class org.shared.net.filter.ChainFilterFactory

Adds the given FilterFactory to the end of this chain.

add(Calculator<I, O>, Calculator<?, ? extends I>...) - Method in class org.shared.parallel.Engine

Adds a non-output Calculator along with its dependencies.

add(Calculator<I, O>, boolean, Collection<? extends Calculator<?, ? extends I>>) - Method in class org.shared.parallel.Engine

Adds a Calculator along with its dependencies.

addClass(String) - Method in class org.shared.metaclass.RegistryClassLoader

Adds a class which requires, for linking purposes, resources exclusive to this class loader.

addEdge(Engine<T>.EngineNode<?, ? extends O>, Engine<T>.EngineNode<? super O, ?>) - Method in class org.shared.parallel.Engine

Links two Engine.EngineNodes by an Engine.EngineEdge.

addOutput(Calculator<I, O>, Calculator<?, ? extends I>...) - Method in class org.shared.parallel.Engine

Adds an output Calculator along with its dependencies.

addPackage(String) - Method in class org.shared.metaclass.RegistryClassLoader

Adds a package whose classes require, for linking purposes, resources exclusive to this class loader.

addPlot(Plottable) - Method in class org.shared.stat.plot.GnuplotContext

addPlot(RealArray...) - Method in class org.shared.stat.plot.GnuplotContext

addPlot(Plottable) - Method in interface org.shared.stat.plot.PlotContext

Creates a Plot at the given coordinates.

addPlot(RealArray...) - Method in interface org.shared.stat.plot.PlotContext

Creates a Plot at the given coordinates.

addPrefixes(String[], int, Annotation) - Method in class org.shared.metaclass.RegistryClassLoader.PrefixNode

Adds the given series of prefixes to the policy hierarchy.

addRegistry(ResourceRegistry) - Method in class org.shared.metaclass.RegistryClassLoader

Adds a registry to the delegation chain.

aEnt() - Method in class org.shared.array.AbstractRealArray

Computes the entropy over the elements.

All - Class in org.shared.test

Contains pure Java tests for the SST.

AllArrayOperationTests - Class in org.shared.test.array

A suite encompassing all Array and Matrix operation tests.

AllArrayUtilTests - Class in org.shared.test.array

A suite encompassing all Array utility tests.

AllFftTests - Class in org.shared.test.fft

A suite encompassing all FFT tests.

AllImageTests - Class in org.shared.test.image

A suite encompassing all image related tests.

AllMlTests - Class in org.shared.test.stat

A suite encompassing all machine learning algorithm tests.

AllNative - Class in org.shared.test

Contains native library tests for the SST.

AllNetTests - Class in org.shared.test.net

A suite encompassing all networking tests.

AllParallelTests - Class in org.shared.test.parallel

A suite encompassing all parallel dataflow tests.

AllStatUtilTests - Class in org.shared.test.stat

A suite encompassing all statistical utility tests.

AllUtilTests - Class in org.shared.test.util

A suite encompassing all convenience class tests.

AllX - Class in org.sharedx.test

Contains extension tests for the SST.

aMax() - Method in class org.shared.array.AbstractRealArray

Computes the maximum over the elements.

aMean() - Method in class org.shared.array.AbstractComplexArray

Computes the mean over the elements.

aMean() - Method in class org.shared.array.AbstractRealArray

Computes the mean over the elements.

aMin() - Method in class org.shared.array.AbstractRealArray

Computes the minimum over the elements.

append(ByteBuffer, ByteBuffer, int) - Static method in class org.shared.net.Buffers

Appends the contents of one buffer onto the end of another.

append(ByteBuffer, ByteBuffer) - Static method in class org.shared.net.Buffers

A facade for Buffers.append(ByteBuffer, ByteBuffer, int).

apply(double, int[]) - Method in interface org.shared.array.AbstractRealArray.RealMap

Applies the mapping.

apply(double, int[]) - Method in interface org.shared.array.AbstractRealArray.RealReduce

Applies the reduction.

applyInbound(Queue<O>, Queue<I>) - Method in interface org.shared.net.filter.Filter

Filters traffic in the inbound direction.

applyInbound(Queue<T>, Queue<T>) - Method in class org.shared.net.filter.IdentityFilterFactory

applyInbound(Queue<ByteBuffer>, Queue<ByteBuffer>) - Method in class org.shared.net.filter.ssl.SslFilter

applyInbound(Queue<ByteBuffer>, Queue<Element>) - Method in class org.shared.net.filter.XmlFilterFactory

applyInbound(Queue<ByteBuffer>, Queue<String>) - Method in class org.shared.test.net.ClientServerTest.Utf8Handler

applyInboundOob(Queue<OobEvent>, Queue<OobEvent>) - Method in class org.shared.net.filter.IdentityFilterFactory

applyInboundOob(Queue<OobEvent>, Queue<OobEvent>) - Method in interface org.shared.net.filter.OobFilter

Processes an OobEvent as it would apply to the inbound direction.

applyInboundOob(Queue<OobEvent>, Queue<OobEvent>) - Method in class org.shared.net.filter.ssl.SslFilter

applyKernelComplexAccumulatorOperation(int) - Method in class org.shared.array.AbstractComplexArray

Supports the a* series of operations.

applyKernelComplexToRealOperation(int) - Method in class org.shared.array.AbstractComplexArray

Supports the tor* series of operations.

applyKernelComplexUnaryOperation(double, double, int) - Method in class org.shared.array.AbstractComplexArray

Supports the u* series of operations.

applyKernelElementwiseOperation(C, int) - Method in class org.shared.array.AbstractComplexArray

Supports the e* series of operations.

applyKernelElementwiseOperation(R, int) - Method in class org.shared.array.AbstractRealArray

Supports the e* series of operations.

applyKernelElementwiseOperation(IntegerArray, int) - Method in class org.shared.array.IntegerArray

Supports the e* series of operations.

applyKernelIntegerUnaryOperation(int, int) - Method in class org.shared.array.IntegerArray

Supports the u* series of operations.

applyKernelLeftElementwiseOperation(C, int) - Method in class org.shared.array.AbstractComplexArray

Supports the l* series of operations.

applyKernelLeftElementwiseOperation(R, int) - Method in class org.shared.array.AbstractRealArray

Supports the l* series of operations.

applyKernelLeftElementwiseOperation(IntegerArray, int) - Method in class org.shared.array.IntegerArray

Supports the l* series of operations.

applyKernelRealAccumulatorOperation(int) - Method in class org.shared.array.AbstractRealArray

Supports the a* series of operations.

applyKernelRealDimensionOperation(int, int[]) - Method in class org.shared.array.AbstractRealArray

Supports the d* series of operations.

applyKernelRealIndexOperation(int, int) - Method in class org.shared.array.AbstractRealArray

Supports the i* series of operations.

applyKernelRealReduceOperation(int, int[]) - Method in class org.shared.array.AbstractRealArray

Supports the r* series of operations.

applyKernelRealToComplexOperation(int) - Method in class org.shared.array.AbstractRealArray

Supports the toc* series of operations.

applyKernelRealUnaryOperation(double, int) - Method in class org.shared.array.AbstractRealArray

Supports the u* series of operations.

applyOutbound(Queue<I>, Queue<O>) - Method in interface org.shared.net.filter.Filter

Filters traffic in the outbound direction.

applyOutbound(Queue<T>, Queue<T>) - Method in class org.shared.net.filter.IdentityFilterFactory

applyOutbound(Queue<ByteBuffer>, Queue<ByteBuffer>) - Method in class org.shared.net.filter.ssl.SslFilter

applyOutbound(Queue<Element>, Queue<ByteBuffer>) - Method in class org.shared.net.filter.XmlFilterFactory

applyOutbound(Queue<String>, Queue<ByteBuffer>) - Method in class org.shared.test.net.ClientServerTest.Utf8Handler

applyOutboundOob(Queue<OobEvent>, Queue<OobEvent>) - Method in class org.shared.net.filter.IdentityFilterFactory

applyOutboundOob(Queue<OobEvent>, Queue<OobEvent>) - Method in interface org.shared.net.filter.OobFilter

Processes an OobEvent as it would apply to the outbound direction.

applyOutboundOob(Queue<OobEvent>, Queue<OobEvent>) - Method in class org.shared.net.filter.ssl.SslFilter

aProd() - Method in class org.shared.array.AbstractComplexArray

Computes the product over the elements.

aProd() - Method in class org.shared.array.AbstractRealArray

Computes the product over the elements.

Arithmetic - Class in org.shared.util

A collection of very basic arithmetic operations on arrays.

Array<T extends Array<T,E>,E> - Interface in org.shared.array

Defines functionality that can be expected from all multidimensional arrays.

Array.IndexingOrder - Interface in org.shared.array

An enumeration of internal storage orders for Arrays.

ArrayBase - Class in org.shared.array

A static utility class for common Array operations.

ArrayFftTest - Class in org.shared.test.fft

A class of unit tests of FFT functionality for all sorts of Array instances.

ArrayFftTest() - Constructor for class org.shared.test.fft.ArrayFftTest

Default constructor.

ArrayIoKernel - Interface in org.shared.array.kernel

A provider of Array I/O operations.

ArrayIoKernelTest - Class in org.shared.test.array

A class of unit tests for ArrayIoKernel and, more specifically, MatlabIoKernel.

ArrayIoKernelTest() - Constructor for class org.shared.test.array.ArrayIoKernelTest

Default constructor.

ArrayKernel - Interface in org.shared.array.kernel

A provider of operations on Arrays.

ArrayKernelTest - Class in org.shared.test.array

A class of unit tests for NativeArrayKernel and JavaArrayKernel, depending on which is selected by ModalArrayKernel.

ArrayKernelTest() - Constructor for class org.shared.test.array.ArrayKernelTest

Default constructor.

Arrays - Class in org.shared.util

A static utility class for manipulating arrays.

ArraysTest - Class in org.shared.test.util

A class of unit tests for Arrays.

ArraysTest() - Constructor for class org.shared.test.util.ArraysTest

Default constructor.

asOobFilter(Filter<I, O>) - Static method in class org.shared.net.filter.Filters

Wraps the given Filter with an OobFilter adapter that has trivial behavior on OobEvents.

assertTrue(boolean) - Static method in class org.shared.util.Control

Asserts that a condition is true.

assign(Object, int[], Object, int[]) - Static method in class org.shared.array.kernel.MappingOps

Assigns source values to destination values based on arrays of physical indices.

assign(V, V, int[][]) - Static method in class org.shared.array.kernel.SparseOps

Aggregates old values, new values, and their assignments into a SparseArrayState.

assign(V) - Method in class org.shared.parallel.LimitedMemoryPolicy

assign(V) - Method in interface org.shared.parallel.TraversalPolicy

Makes a total ordering and depth assignment to all nodes reachable from the given node.

assignBaseIndices(int, int[], int[], int) - Static method in class org.shared.array.kernel.DimensionOps

Assigns base indices when excluding a dimension.

assignDepthFirst(LimitedMemoryPolicy<V, E>.PolicyNode, Set<LimitedMemoryPolicy<V, E>.PolicyNode>, Set<LimitedMemoryPolicy<V, E>.PolicyNode>, int) - Method in class org.shared.parallel.LimitedMemoryPolicy

A recursive subroutine for assigning traversal orders while traversing the LimitedMemoryPolicy.PolicyNode graph in a depth-first manner.

assignMappingIndices(int, int[], int[]) - Static method in class org.shared.array.kernel.MappingOps

Creates an array of physical indices.

assignSlicingIndices(int, int[], int[][]) - Static method in class org.shared.array.kernel.MappingOps

Creates an array of physical slicing indices.

aSum() - Method in class org.shared.array.AbstractComplexArray

Computes the sum over the elements.

aSum() - Method in class org.shared.array.AbstractRealArray

Computes the sum over the elements.

AsynchronousHandlerTest - Class in org.shared.test.net

A class of unit tests for NioManager.

AsynchronousHandlerTest(Properties) - Constructor for class org.shared.test.net.AsynchronousHandlerTest

Default constructor.

available() - Method in class org.shared.net.handler.SynchronousHandler.ManagedInputStream

Gets the number of readable bytes before blocking.

aVar() - Method in class org.shared.array.AbstractRealArray

Computes the variance over the elements.

axisRange - Static variable in class org.shared.stat.plot.Scatter

The generic axis range.

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